expos: Gene expression, annotations and clinical data from the...
In bhklab/genefu: Computation of Gene Expression-Based Signatures in Breast Cancer
expos R Documentation
Gene expression, annotations and clinical data from the International Genomics Consortium
Description
This dataset contains (part of) the gene expression, annotations and clinical data from the expO dataset collected by the International Genomics Consortium ().
Usage
data(expos)
Format
expos is a dataset containing three matrices
data.expos: Matrix containing gene expressions as measured by Affymetrix hgu133plus2 technology (single-channel, oligonucleotides)
annot.expos: Matrix containing annotations of ffymetrix hgu133plus2 microarray platform
demo.expos: Clinical information of the breast cancer patients whose tumors were hybridized
Source
http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE2109
References
International Genomics Consortium, http://www.intgen.org/research-services/biobanking-experience/expo/
McCall MN, Bolstad BM, Irizarry RA. (2010) "Frozen robust multiarray analysis (fRMA)", Biostatistics, 11(2):242-253.
bhklab/genefu documentation built on Nov. 30, 2024, 9:03 p.m.
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| expos | R Documentation |
Gene expression, annotations and clinical data from the International Genomics Consortium
Description
This dataset contains (part of) the gene expression, annotations and clinical data from the expO dataset collected by the International Genomics Consortium ().
Usage
data(expos)
Format
expos is a dataset containing three matrices
data.expos: Matrix containing gene expressions as measured by Affymetrix hgu133plus2 technology (single-channel, oligonucleotides)
annot.expos: Matrix containing annotations of ffymetrix hgu133plus2 microarray platform
demo.expos: Clinical information of the breast cancer patients whose tumors were hybridized
Source
http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE2109
References
International Genomics Consortium, http://www.intgen.org/research-services/biobanking-experience/expo/ McCall MN, Bolstad BM, Irizarry RA. (2010) "Frozen robust multiarray analysis (fRMA)", Biostatistics, 11(2):242-253.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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