AvgCellExprs: AvgCellExprs
In bimberlabinternal/OOSAP: OHSU-ONPRC Single-cell Analysis Package
Description
Usage
Arguments
Value
Description
AvgCellExprs
Usage
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AvgCellExprs(
seuratObj,
varName = "ClusterNames_0.2",
genes,
slot = "data",
useSeuratMethod = T
)
Arguments
seuratObj,
A Seurat object.
varName
The resolution/ident to use
genes
A vector of genes to include
slot
The slot to use, passed to GetAssayData
useSeuratMethod
This function now defaults to the base Seurat method set to T. If a simple average is needed set to F.
Value
A data.frame of avg expression per var
bimberlabinternal/OOSAP documentation built on Jan. 19, 2021, 2:47 a.m.
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Description Usage Arguments Value
Description
AvgCellExprs
Usage
1 2 3 4 5 6 7 | AvgCellExprs(
seuratObj,
varName = "ClusterNames_0.2",
genes,
slot = "data",
useSeuratMethod = T
)
|
Arguments
seuratObj, |
A Seurat object. |
varName |
The resolution/ident to use |
genes |
A vector of genes to include |
slot |
The slot to use, passed to GetAssayData |
useSeuratMethod |
This function now defaults to the base Seurat method set to T. If a simple average is needed set to F. |
Value
A data.frame of avg expression per var
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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