DimPlot_SingleRClassLabs: DimPlot SingleR Class Labels

Description Usage Arguments

View source: R/SingleR_Seurat.R

Description

Create a Dimplot from a Seurat object with SingleR class labels

Usage

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DimPlot_SingleRClassLabs(
  seuratObject,
  plotIndividually = F,
  datasets = c("hpca")
)

Arguments

seuratObject

a Seurat object, but if path given, path is prioritized.

plotIndividually

If true, two separate plots will be printed. Otherwise a single plot wil be printed with one above the other

datasets

One or more datasets to use as a reference. Allowable values are: hpca, blueprint, dice, monaco, and immgen. See cellDex package for available datasets.


bimberlabinternal/OOSAP documentation built on Jan. 19, 2021, 2:47 a.m.