Description Usage Arguments Examples

Calculate the 'GXY' frame of a peptide, and use probabilities of hdroxylation for prolines at different positions to estimate the probability of every possible level of hydroxylation

1 2 | ```
ba_gxy_probs(seq, xprob = 0.05, yprob = 0.95, xyxprob = 0.5,
xyyprob = 0.99, verbose = F)
``` |

`seq` |
a peptide sequence |

`xprob` |
the probability of hydroxylation at the X position |

`yprob` |
the probability of hydroxylation at the Y position |

`xyxprob` |
the probability of hydroxylation at the X position if the Y position is also Proline |

`xyyprob` |
the probability of hydroxylaiton at the Y position if the X position is also Proline |

`verbose` |
set to TRUE for more verbose processing |

1 |

bioarch-sjh/bacollite documentation built on Dec. 13, 2018, 10:28 p.m.

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