Files in bioarch-sjh/bacollite
analysis of MALDI and LC-MS/MS spectral data using sequence data (mainly for collagen)

.RDataTmp
.RDataTmp1
.RDataTmp2
.RDataTmp3
.RDataTmp4
.RDataTmp5
.Rbuildignore
.gitignore
.httr-oauth
DESCRIPTION
INSTALL.md
LICENSE
NAMESPACE
R/RcppExports.R R/ba_gxy_probs.R R/ba_nhyd.R R/ba_plotseqpeaks.R R/cut_with_enzyme.R R/gpm_load.R R/hello.R R/human_markers.R R/lag_plot.R R/ms_align.R R/ms_fit.R R/ms_iso.R R/ms_iso_atom.R R/ms_load.R R/ms_subrange.R R/ms_tpeaks.R R/msms_align.R R/parse_seq.R R/ratios.R R/seq_to_atoms.R R/sppdiffs.R
R/sysdata.rda
R/usedynlib.R R/validseq.R R/xy_pos_prolines.R README.md TUTORIAL.md analysis.md
bacollite.Rproj
data/amino_acid_codes.rda
data/bioarch_mammal_sequences.rda
data/bioarch_mammal_sequences1.0.0.rda
inst/extdata/Human_Peptide_Marker_Alternatives.dat
inst/extdata/Human_Peptide_Marker_Alternatives.dat~
inst/extdata/Human_Peptide_Markers.dat
inst/extdata/Human_Peptide_Markers.dat~
inst/extdata/Human_Peptide_Markers2.dat
inst/extdata/Human_Peptide_Markers2.dat~
inst/extdata/gpm_human_collagen_COL1A1.dat
inst/extdata/gpm_human_collagen_COL1A2.dat
man/ba_gxy_probs.Rd man/ba_nhyd.Rd man/ba_plotseqpeaks.Rd man/hello.Rd man/lag_plot.Rd man/load.gpm.Rd man/load.gpm.raw.Rd man/load.human.markers.Rd man/load.mcs.Rd man/load.sample.Rd man/load.sequence.Rd man/ms_align.Rd man/ms_fit.Rd man/ms_iso.Rd man/ms_iso_atom.Rd man/ms_subrange.Rd man/ms_tpeaks.Rd man/parse.seq.Rd man/peptide.ratio.Rd man/seq_to_atoms.Rd man/timesTwo.Rd man/ts_index.Rd man/validseq.Rd man/xy.ypos.prolines.Rd
src-i386/RcppExports.cpp
src-i386/RcppExports.o
src-i386/RcppIso.cpp
src-i386/RcppIso.o
src-i386/bacollite.dll
src-i386/riso.cpp
src-i386/riso.h
src-i386/riso.o
src-i386/timestwo.cpp
src-i386/timestwo.o
src-x64/RcppExports.cpp
src-x64/RcppExports.o
src-x64/RcppIso.cpp
src-x64/RcppIso.o
src-x64/bacollite.dll
src-x64/riso.cpp
src-x64/riso.h
src-x64/riso.o
src-x64/timestwo.cpp
src-x64/timestwo.o
src/.gitignore
src/RcppExports.cpp
src/RcppIso.cpp
src/riso.cpp
src/riso.h
src/timestwo.cpp
tests/testthat.R tests/testthat/test_seqdata.R
vignettes/.build.timestamp
vignettes/mammalian-collagen-data.R vignettes/mammalian-collagen-data.Rmd vignettes/visible.Rmd
withoutR/cpp/Makefile
withoutR/cpp/Makefile~
withoutR/cpp/README.md
withoutR/cpp/README.md~
withoutR/cpp/riso.cpp
withoutR/cpp/riso.h
withoutR/cpp/riso.h~
withoutR/cpp/riso.o
withoutR/cpp/test_iso
withoutR/cpp/test_iso.cpp
withoutR/cpp/test_iso.cpp~
withoutR/cpp/test_iso.o
bioarch-sjh/bacollite documentation built on Dec. 13, 2018, 10:28 p.m.