corlim_data: Take the output of ms_fit and convert to hits for a range of...
In bioarch-sjh/bacollite: Analysis of MALDI and LC-MS/MS spectral data using sequence data (mainly for collagen)
corlim_data R Documentation
Take the output of ms_fit and convert to hits for a range of correlation thresholds
Description
Take the output of ms_fit and convert to hits for a range of correlation thresholds
Usage
corlim_data(fn_hits, fn_laglim, fn_corlim = seq(0, 1, 0.05))
Arguments
fn_hits
the dataframe returned by ms_fit
fn_laglim
the max permissable lag
fn_corlim
the set of correlation thresholds
Value
a list of dataframes, one for each replicate, each containing the following fields
cl
The correlation limit
nh
The number of hits above the limit
sc
The sum of ion counts for hits
bioarch-sjh/bacollite documentation built on Oct. 7, 2022, 3:34 p.m.
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| corlim_data | R Documentation |
Take the output of ms_fit and convert to hits for a range of correlation thresholds
Description
Take the output of ms_fit and convert to hits for a range of correlation thresholds
Usage
corlim_data(fn_hits, fn_laglim, fn_corlim = seq(0, 1, 0.05))
Arguments
fn_hits |
the dataframe returned by ms_fit |
fn_laglim |
the max permissable lag |
fn_corlim |
the set of correlation thresholds |
Value
a list of dataframes, one for each replicate, each containing the following fields
cl |
The correlation limit |
nh |
The number of hits above the limit |
sc |
The sum of ion counts for hits |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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