getmu_post_optimize: getmu_post_optimize

In bioinform/ecTMB: Esitmation and Classification of TMB

Description

get optimized mu ########

Usage

getmu_post_optimize(y, offset, mu1, mu2, phi, sigma, span, cores,
  zero_p = 0)

Arguments

y	The input data
offset	offset of input data
mu1	mu_hat
mu2	mu_hat_glm
phi	dispersion parameter when negative binomial model is used. Otherwise, it will be 0.
sigma	dispersion
span	The extention
cores	number of thread
zero_p	probability of zero portion if zero-inflated model is used. Otherwise, it will be 0

Value

A vector mutation count for 96 trinucleotide context

Examples

## Not run: 
getmu_post_optimize(mut, gid)

## End(Not run)

bioinform/ecTMB documentation built on Aug. 29, 2021, 6:17 p.m.