readA | R Documentation |
readA
readA(Afile, datfile, dat, annot = TRUE)
Afile |
The file which contains the matrix of sample
contributions. It must be a txt file where the separator
is |
datfile |
The file which contains the matrix (of dimension features x samples) based on which the matrix A was calculated |
dat |
The data based on which the matrix A was calculated (features x samples) |
annot |
TRUE (default) if the Afile contains rownames of matrix A, FALSE if the rownames has to be extracted from dat |
This function reads and annotates matrix A.
The matrix dat must be the one on which the matrix A was
calculated. It is assumed that the number of components
is lower than the number of samples, the matrix will be
transposed to have dimension 'samples x components'
according to this assumption. If annot
is FALSE,
colnames of dat are used to annotate rownames of A.
This function returns a matrix of dimension samples x components with rownames filled with sample IDs.
Anne Biton
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.