bb_plot_heatmap_colData: Plot SummarizedHeatmap colData

In blaserlab/blaseRtools: R Tools for Blaser Lab Data Analysis

Plot SummarizedHeatmap colData

Description

Will generate a ggplot from the colData of a SummarizedHeatmap object. Typically this will be placed at the top or bottom of a plot. If flipped, use the side argument to put the colData on the left or right.

Usage

bb_plot_heatmap_colData(
  obj,
  tile_color = "white",
  vars = colnames(colData(obj)),
  side = c("top", "bottom", "right", "left"),
  manual_pal = NULL
)

Arguments

obj	a SummarizedHeatmap object
tile_color	Outline color for the tiles, Default: 'white'
vars	Variables to plot. Supply a named vector to change the axis text and legend titles for each variable, Default: colnames(colData(obj))
side	Side on which to plot, Default: c("top", "bottom", "right", "left")
manual_pal	a color palette, preferably a named vector corresponding to values of colData, Default: NULL

Value

a ggplot

blaserlab/blaseRtools documentation built on April 14, 2025, 6:04 p.m.