bb_plot_trace_peaks: Plot The peak Data From A Trace Object

In blaserlab/blaseRtools: R Tools for Blaser Lab Data Analysis

Plot The peak Data From A Trace Object

Description

A function to generate a peak plot from tracklike genomic data.

Usage

bb_plot_trace_peaks(
  trace,
  group_filter = NULL,
  group_variable = "group",
  pal = NULL
)

Arguments

trace	A Trace object.
group_filter	Optional value to filter the peak data by. Should be a value from the "group" metadata variable in the trace object.
group_variable	Optional metadatavariable to filter trace data by. When imported from signac/seurat objects, this value defaults to "group", so that is the default here. However if constructed manually, you may wish to apply filtering to another variable. If so, apply it to this parameter.
fill_color	The color to fill the peak graphics with. Defaults to grey60.

blaserlab/blaseRtools documentation built on April 14, 2025, 6:04 p.m.