bb_split_citeseq: Split Antibody Capture Data into Alt Experiment
In blaserlab/blaseRtools: R Tools for Blaser Lab Data Analysis
bb_split_citeseq R Documentation
Split Antibody Capture Data into Alt Experiment
Description
If you have cite-seq data together with gene expression data, this function will move the cite seq data to a new separate experiment. It will use Seurat to normalize these data using the CLR method and store them in a new assay.
Usage
bb_split_citeseq(cds)
Arguments
cds
the cell data set to split
Value
a new CDS
See Also
SummarizedExperiment-class
blaserlab/blaseRtools documentation built on April 14, 2025, 6:04 p.m.
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| bb_split_citeseq | R Documentation |
Split Antibody Capture Data into Alt Experiment
Description
If you have cite-seq data together with gene expression data, this function will move the cite seq data to a new separate experiment. It will use Seurat to normalize these data using the CLR method and store them in a new assay.
Usage
bb_split_citeseq(cds)
Arguments
cds |
the cell data set to split |
Value
a new CDS
See Also
SummarizedExperiment-class
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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