bb_unblind_images: Rejoin Blinded Scores to Original File Names

In blaserlab/blaseRtools: R Tools for Blaser Lab Data Analysis

Rejoin Blinded Scores to Original File Names

Description

Will rejoin scoresheet and blinded key to produce unblinded results. If you change the names of either of those files, they have to be provided as arguments to the function. Otherwise keyfile and scorefile are optional.

Usage

bb_unblind_images(
  directory,
  keyfile = "blinding_key.csv",
  scorefile = "scoresheet.csv",
  analysis_file,
  file_column
)

Arguments

directory	The linux-style filepath of the folder containing the scoresheet and blinded key.
keyfile	Optional: filename of the key file. Defaults to "blinding_key.csv".
scorefile	Optional: filename of the score file. Defaults to "scoresheet.csv".
analysis_file	Complete file path to the the unblinded main analysis sheet. The function will will left_join analysis_file and unblinded results. In the process, it will necessarily convert windows file paths to linux-style file paths. Samples not included in the blinding should return with NA values for the added columns. New data columns being added on from scoresheet should be unique relative to analysis_file.
file_column	The column in analysis_file containing file paths for the files that were blinded.

Value

nothing

blaserlab/blaseRtools documentation built on April 14, 2025, 6:04 p.m.