README.md

In bmhoan/MMDR: Analysis of OTU and Functional 16S data

MMDR

Microbiome Marker Discovery: Variability and Differential Analysis : In contructions!!

Created by Dong Binh, just for testing

git clone https://github.com/bmhoan/MMDR.git

R install

install.packages("MMD/",repos=NULL,type="source")

Handling and analyzation of 16S dataset including OTU and Functional data

This package contains functions for handling, quality control and analyzation of data created on the OTU by USEARCH and predictive functional by Picrust2 -statistical summary reporting

-Normalization and transformation methods

-Differential Abundance analysis

-Correlation and Variable Selections

-Integrated network analysis

bmhoan/MMDR documentation built on July 4, 2019, 4:37 p.m.