readingOtuData: Function to parse the content of OTU and KO files
In bmhoan/MMDR: Analysis of OTU and Functional 16S data
Description
Usage
Arguments
Value
Examples
Description
Function to parse the content of OTU and KO files
Usage
1
readingOtuData(otutable_path, otutaxa_path, spmeta_path)
Arguments
otutable_path
The file path of otu
otutaxa_path
The file path of rdp classification
Value
OTU oject including otu tab
Examples
1
readingOtuData("C:/Microbiome/MMDRPipeline/data/ben1/ben1_16s_otu_table.tsv","C:/Microbiome/MMDRPipeline/data/ben1/ben1_16s_otu_taxa.tsv","C:/Microbiome/MMDRPipeline/data/ben1/ben1_16s_sp_metadata.tsv")
bmhoan/MMDR documentation built on July 4, 2019, 4:37 p.m.
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Description Usage Arguments Value Examples
Description
Function to parse the content of OTU and KO files
Usage
1 | readingOtuData(otutable_path, otutaxa_path, spmeta_path)
|
Arguments
otutable_path |
The file path of otu |
otutaxa_path |
The file path of rdp classification |
Value
OTU oject including otu tab
Examples
1 | readingOtuData("C:/Microbiome/MMDRPipeline/data/ben1/ben1_16s_otu_table.tsv","C:/Microbiome/MMDRPipeline/data/ben1/ben1_16s_otu_taxa.tsv","C:/Microbiome/MMDRPipeline/data/ben1/ben1_16s_sp_metadata.tsv")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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