Files in bobverity/RMavericK
Analysis of population structure

.Rbuildignore
.github/.gitignore
.github/workflows/develop_build.yaml
.github/workflows/master_build.yaml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/RcppExports.R R/assertions_v15.R R/data.R R/main.R R/mavproject.R R/misc.R R/plot.R R/rmaverick.R R/test_wrappers.R README.md
R_ignore/images/documentation-click here!-blue.png
_pkgdown.yml
codecov.yml
docs/404.html
docs/LICENSE-text.html
docs/articles/basic_tutorial.html
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-1-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-1-2.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-11-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-12-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-13-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-14-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-15-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-16-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-17-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-18-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-19-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-19-2.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-20-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-20-2.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-21-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-21-2.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-22-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-22-2.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-23-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-24-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-25-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-25-2.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-26-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-27-1.png
docs/articles/basic_tutorial_files/figure-html/unnamed-chunk-27-2.png
docs/articles/basic_tutorial_files/header-attrs-2.10/header-attrs.js
docs/articles/faq.html
docs/articles/faq_files/header-attrs-2.10/header-attrs.js
docs/articles/index.html
docs/articles/installation.html
docs/articles/installation_files/figure-html/unnamed-chunk-1-1.png
docs/articles/installation_files/figure-html/unnamed-chunk-1-2.png
docs/articles/installation_files/header-attrs-2.10/header-attrs.js
docs/articles/known-issues.html
docs/articles/known-issues_files/header-attrs-2.10/header-attrs.js
docs/articles/parallel.html
docs/articles/parallel_files/figure-html/unnamed-chunk-1-1.png
docs/articles/parallel_files/figure-html/unnamed-chunk-1-2.png
docs/articles/parallel_files/header-attrs-2.10/header-attrs.js
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/jquery.sticky-kit.min.js
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/bind_data.html
docs/reference/change_set.html
docs/reference/check_rmaverick_loaded.html
docs/reference/delete_set.html
docs/reference/figures/README-unnamed-chunk-15-1.png
docs/reference/figures/README-unnamed-chunk-16-1.png
docs/reference/figures/README-unnamed-chunk-17-1.png
docs/reference/figures/README-unnamed-chunk-18-1.png
docs/reference/figures/README-unnamed-chunk-21-1.png
docs/reference/figures/README-unnamed-chunk-22-1.png
docs/reference/figures/README-unnamed-chunk-23-1.png
docs/reference/figures/README-unnamed-chunk-23-2.png
docs/reference/figures/README-unnamed-chunk-24-1.png
docs/reference/figures/README-unnamed-chunk-25-1.png
docs/reference/figures/README-unnamed-chunk-25-2.png
docs/reference/generate_scaffolds.html
docs/reference/get_ESS.html
docs/reference/get_qmatrix.html
docs/reference/index.html
docs/reference/is.maverick_GTI_logevidence.html
docs/reference/is.maverick_GTI_logevidence_model.html
docs/reference/is.maverick_GTI_path.html
docs/reference/is.maverick_GTI_posterior.html
docs/reference/is.maverick_GTI_posterior_model.html
docs/reference/is.maverick_loglike_quantiles.html
docs/reference/is.maverick_qmatrix_ind.html
docs/reference/is.mavproject.html
docs/reference/maverick_file.html
docs/reference/mavproject.html
docs/reference/new_set.html
docs/reference/plot.maverick_GTI_logevidence.html
docs/reference/plot.maverick_GTI_logevidence_model.html
docs/reference/plot.maverick_GTI_path.html
docs/reference/plot.maverick_GTI_posterior.html
docs/reference/plot.maverick_GTI_posterior_model.html
docs/reference/plot.maverick_loglike_quantiles.html
docs/reference/plot.maverick_qmatrix_ind.html
docs/reference/plot_GTI_path.html
docs/reference/plot_acf.html
docs/reference/plot_alpha.html
docs/reference/plot_density.html
docs/reference/plot_logevidence_K.html
docs/reference/plot_logevidence_model.html
docs/reference/plot_loglike.html
docs/reference/plot_loglike_quantiles.html
docs/reference/plot_mc_acceptance.html
docs/reference/plot_posterior_K.html
docs/reference/plot_posterior_model.html
docs/reference/plot_qmatrix.html
docs/reference/plot_qmatrix_ind.html
docs/reference/plot_trace.html
docs/reference/print.maverick_GTI_logevidence.html
docs/reference/print.maverick_GTI_logevidence_model.html
docs/reference/print.maverick_GTI_path.html
docs/reference/print.maverick_GTI_posterior.html
docs/reference/print.maverick_GTI_posterior_model.html
docs/reference/print.maverick_loglike_quantiles.html
docs/reference/print.maverick_qmatrix_ind.html
docs/reference/print.mavproject.html
docs/reference/print_full.html
docs/reference/recalculate_evidence.html
docs/reference/rmaverick.html
docs/reference/run_mcmc.html
docs/reference/sim_data.html
docs/reference/summary.mavproject.html
index.md man/bind_data.Rd man/change_set.Rd man/check_rmaverick_loaded.Rd man/delete_set.Rd man/get_qmatrix.Rd man/is.mavproject.Rd man/maverick_file.Rd man/mavproject.Rd man/new_set.Rd man/plot_GTI_path.Rd man/plot_acf.Rd man/plot_alpha.Rd man/plot_density.Rd man/plot_logevidence_K.Rd man/plot_logevidence_model.Rd man/plot_loglike.Rd man/plot_loglike_quantiles.Rd man/plot_mc_acceptance.Rd man/plot_posterior_K.Rd man/plot_posterior_model.Rd man/plot_qmatrix.Rd man/plot_trace.Rd man/print.mavproject.Rd man/print_full.Rd man/recalculate_evidence.Rd man/rmaverick.Rd man/run_mcmc.Rd man/sim_data.Rd man/summary.mavproject.Rd
src/Hungarian.cpp
src/Hungarian.h
src/RcppExports.cpp
src/main.cpp
src/main.h
src/mcmc_admix.cpp
src/mcmc_admix.h
src/mcmc_noadmix.cpp
src/mcmc_noadmix.h
src/misc.cpp
src/misc.h
src/particle_admix.cpp
src/particle_admix.h
src/particle_noadmix.cpp
src/particle_noadmix.h
src/probability.cpp
src/probability.h
src/test_wrappers.cpp
src/test_wrappers.h
tests/testthat.R tests/testthat/Rplots.pdf tests/testthat/test-assertions_v15.R tests/testthat/test-main.R tests/testthat/test-misc.R
vignettes/.gitignore
vignettes/basic_tutorial.Rmd vignettes/faq.Rmd vignettes/installation.Rmd vignettes/known-issues.Rmd vignettes/parallel.Rmd
bobverity/RMavericK documentation built on Jan. 16, 2022, 4:49 a.m.