plot_trace: Produce MCMC trace plot

Description Usage Arguments

View source: R/plot.R

Description

Produce MCMC trace plot of alpha or log-likelihood

Usage

1
plot_trace(proj, K = NULL, rung = NULL, param = "alpha", col = "black")

Arguments

proj

an rmaverick project, as produced by the function mavproject()

K

which value of K to produce the plot for

rung

which value of K to produce the plot for. Defaults to the cold rung

param

whether to produce trace plot of admixture parameter ("alpha") or the log-likelihood ("loglike")

col

colour of the trace


bobverity/RMavericK documentation built on Jan. 16, 2022, 4:49 a.m.