Man pages for bobverity/RMavericK
Analysis of population structure

bind_dataBind data to project
change_setChange active parameter set
check_rmaverick_loadedCheck that rmaverick package has loaded successfully
delete_setDelete parameter set
get_qmatrixExtract q-matrix for a given analysis
is.mavprojectDetermine if object is of class mavproject
maverick_fileImport file
mavprojectCreate a new rmaverick project
new_setCreate new parameter set
plot_acfProduce MCMC autocorrelation plot
plot_alphaProduce diagnostic plots of parameter alpha
plot_densityProduce MCMC density plot
plot_GTI_pathPlot GTI path of current active set
plot_logevidence_KPlot log-evidence estimates over K
plot_logevidence_modelPlot log-evidence estimates over parameter sets
plot_loglikeProduce diagnostic plots of log-likelihood
plot_loglike_quantilesPlot loglike quantiles of current active set
plot_posterior_KPlot posterior K
plot_posterior_modelPlot posterior model
plot_qmatrixPlot Q-matrix of current active set
plot_traceProduce MCMC trace plot
print_fullOrdinary print function for class mavproject
print.mavprojectCustom print function for class mavproject
recalculate_evidenceRecalculate evidence and posterior estimates
rmaverickrmaverick package
run_mcmcRun main MCMC
sim_dataSimulate data
summary.mavprojectPrint summary for class mavproject
bobverity/RMavericK documentation built on May 12, 2019, 11:28 p.m.