Files in bschiffthaler/BatchMap
Software for the Creation of High Density Linkage Maps in Outcrossing Species

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/RcppExports.R R/acum.R R/add.marker.R R/adjust.rils.R R/avoid.reverse.R R/codif.data.R R/comb.ger.R R/combine.onemap.R R/compare.R R/cpp.utils.R R/create.dataset.bins.R R/draw.map.R R/drop.marker.R R/find.bins.R R/get.info.2pt.R R/group.R R/make.seq.R R/map.R R/map.func.R R/marker.type.R R/order.seq.R R/overlapping.batches.R R/permutations.R R/phases.R R/plot.raw.data.R R/pseudo.testcross.split.R R/rcd.R R/read.mapmaker.R R/read.onemap.R R/read.outcross.R R/read.outcross2.R R/record.R R/record.parallel.rfc.R R/return.geno.R R/rf.2pts.R R/ripple.ord.R R/ripple.seq.R R/seeded.map.R R/seriation.R R/suggest.lod.R R/test.segregation.R R/try.seq.R R/ug.R R/write.map.R R/zzz.R README.md
data/example.out.RData
inst/doc/BatchMap.R inst/doc/BatchMap.Rmd
inst/doc/BatchMap.html
inst/example/.gitignore
inst/example/cached.results.RData
inst/example/example.out.txt
inst/example/sim7.5k.txt.gz
man/Bonferroni.alpha.Rd man/add.marker.Rd man/combine.onemap.Rd man/compare.Rd man/create.data.bins.Rd man/create.dataframe.for.plot.outcross.Rd man/draw.map.Rd man/drop.marker.Rd man/est_map_hmm_out.Rd man/example.out.Rd man/find.bins.Rd man/group.Rd man/make.seq.Rd man/map.Rd man/map.overlapping.batches.Rd man/map_func.Rd man/marker.type.Rd man/onemap-internal.Rd man/order.seq.Rd man/pick.batch.sizes.Rd man/plot.by.segreg.type.Rd man/plot.onemap.Rd man/plot.onemap.segreg.test.Rd man/print.group.Rd man/print.onemap.segreg.test.Rd man/print.outcross.Rd man/print.rf.2pts.Rd man/print.try.Rd man/pseudo.testcross.split.Rd man/rcd.Rd man/read.mapmaker.Rd man/read.onemap.Rd man/read.outcross.Rd man/read.outcross2.Rd man/record.Rd man/record.parallel.Rd man/rf.2pts.Rd man/ripple.ord.Rd man/ripple.seq.Rd man/ripple.window.Rd man/seeded.map.Rd man/select.segreg.Rd man/seriation.Rd man/set.map.fun.Rd man/suggest.lod.Rd man/test.segregation.Rd man/test.segregation.of.a.marker.Rd man/try.seq.Rd man/ug.Rd man/write.map.Rd
onemap.Rproj
src/GET_RF.cpp
src/Makevars
src/Makevars.win
src/READ_OUTCROSS.cpp
src/RcppExports.cpp
src/find_bins.cpp
src/find_bins.h
src/hmm_out.cpp
src/hmm_out.h
src/out_est.cpp
src/out_est.h
src/progressBar.h
src/record.cpp
src/registration.c
src/twopts_out.cpp
src/twopts_out.h
src/utils.cpp
src/utils.h
vignettes/BatchMap.Rmd
bschiffthaler/BatchMap documentation built on May 11, 2017, 6:42 p.m.