buschlab/MBECS: Evaluation and correction of batch effects in microbiome data-sets

The Microbiome Batch Effect Correction Suite (MBECS) provides a set of functions to evaluate and mitigate unwated noise due to processing in batches. To that end it incorporates a host of batch correcting algorithms from various packages. In addition it offers a correction and reporting pipeline that provides a preliminary look at the characteristics of a data-set before and after correcting for batch effects.

Getting started

Package details

Bioconductor views BatchEffect Microbiome
Maintainer
LicenseMIT + file LICENSE
Version0.99.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("buschlab/MBECS")
buschlab/MBECS documentation built on Jan. 21, 2022, 1:27 a.m.