In c5sire/kmerize: K-Mer Tools for Building Databases

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>"
)

library(kmerize)

This package

install.packages("devtools")
devtools::install_github("c5sire/kmerize")

Supporting tools

This package uses 3rd party tools for basic optimized k-mer creation. Currently, this is the KMC3 set of tools (REF). The toolkit needs to be installed via the provided function. If no reference to a local file is provided, the appropriate version for your local operating sytem (OS) will automatically be chosen as shown below.

kmerize::kmr_install_kmc()

c5sire/kmerize documentation built on June 7, 2020, 9:26 p.m.