createCodonMatrix: Create codon matrix from coding nucleotide sequence
In caggtaagtat/ModCon: Modifying splice site usage by changing the mRNP code, while maintaining the genetic code
Description
Usage
Arguments
Value
Examples
View source: R/createCodonMatrix.R
Description
This function creates a codon matrix with 2 rows and as many columns as codons within the sequence.
Usage
1
Arguments
cds
Character value of nucleotide sequence whose HZEI integral will be calculated. It should be at least 3 nt long and only contain bases 'A', 'G', 'C', 'T'. Length must be a multiple of 3.
Value
Character matrix holding the encoded codon sequence in both rows.
Examples
1
2
## Example to create codon matrix
createCodonMatrix("ATGAATGATCAAAAGCTAGCC")
caggtaagtat/ModCon documentation built on March 12, 2021, 4:12 a.m.
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Description Usage Arguments Value Examples
View source: R/createCodonMatrix.R
Description
This function creates a codon matrix with 2 rows and as many columns as codons within the sequence.
Usage
1 |
Arguments
cds |
Character value of nucleotide sequence whose HZEI integral will be calculated. It should be at least 3 nt long and only contain bases 'A', 'G', 'C', 'T'. Length must be a multiple of 3. |
Value
Character matrix holding the encoded codon sequence in both rows.
Examples
1 2 | ## Example to create codon matrix
createCodonMatrix("ATGAATGATCAAAAGCTAGCC")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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