Files in caggtaagtat/VarCon
VarCon
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/calculateHZEIperNT.R
R/calculateMaxEntScanScore.R
R/generateHEXplorerPlot.R
R/getMaxEntInfo.R
R/getSeqInfoFromVariation.R
R/prepareReferenceFasta.R
R/startVarConApp.R
R/sysdata.rda
README.md
data/gene2transcript.rda
data/hbg.rda
data/hex.rda
data/referenceDnaStringSet.rda
data/transCoord.rda
inst/extdata/app.R
inst/extdata/exampleTransCoord
inst/extdata/me2x5
inst/extdata/referenceDnaStringSet.fa
inst/extdata/score3.pl
inst/extdata/score5.pl
inst/extdata/splicemodels/hashseq.m
inst/extdata/splicemodels/hashseq.m~
inst/extdata/splicemodels/me1s0acc1
inst/extdata/splicemodels/me1s0acc2
inst/extdata/splicemodels/me1s0acc3
inst/extdata/splicemodels/me1s0acc4
inst/extdata/splicemodels/me1s0acc5
inst/extdata/splicemodels/me1s0acc6
inst/extdata/splicemodels/me1s0acc7
inst/extdata/splicemodels/me1s0acc8
inst/extdata/splicemodels/me1s0acc9
inst/extdata/splicemodels/me2s0
inst/extdata/splicemodels/me2s0acc1
inst/extdata/splicemodels/me2s0acc2
inst/extdata/splicemodels/me2s0acc3
inst/extdata/splicemodels/me2s0acc4
inst/extdata/splicemodels/me2s0acc5
inst/extdata/splicemodels/me2s0acc6
inst/extdata/splicemodels/me2s0acc7
inst/extdata/splicemodels/me2s0acc8
inst/extdata/splicemodels/me2s0acc9
inst/extdata/splicemodels/me2x3acc1
inst/extdata/splicemodels/me2x3acc2
inst/extdata/splicemodels/me2x3acc3
inst/extdata/splicemodels/me2x3acc4
inst/extdata/splicemodels/me2x3acc5
inst/extdata/splicemodels/me2x3acc6
inst/extdata/splicemodels/me2x3acc7
inst/extdata/splicemodels/me2x3acc8
inst/extdata/splicemodels/me2x3acc9
inst/extdata/splicemodels/me2x5
inst/extdata/splicemodels/splice5sequences
inst/extdata/test3
inst/extdata/test5
man/calculateHZEIperNT.Rd
man/calculateMaxEntScanScore.Rd
man/gene2transcript.Rd
man/generateHEXplorerPlot.Rd
man/getMaxEntInfo.Rd
man/getSeqInfoFromVariation.Rd
man/hbg.Rd
man/hex.Rd
man/prepareReferenceFasta.Rd
man/referenceDnaStringSet.Rd
man/startVarConApp.Rd
man/transCoord.Rd
tests/testthat.R
tests/testthat/test-calculateHZEIint.R
tests/testthat/test-calculateMaxEntScanScore.R
vignettes/VarCon.Rmd
