matching_options: Possible choices for the 'matching_opt' parameter.

In calabrialab/ISAnalytics: Analyze gene therapy vector insertion sites data identified from genomics next generation sequencing reads for clonal tracking studies

Possible choices for the matching_opt parameter.

Description

These are all the possible values for the matching_opt parameter in import_parallel_vispa2Matrices_auto.

Usage

matching_options()

Details

The values "ANY", "ALL" and "OPTIONAL", represent how the patterns should be matched, more specifically

• ANY = look only for files that match AT LEAST one of the patterns specified

• ALL = look only for files that match ALL of the patterns specified

• OPTIONAL = look preferentially for files that match, in order, all patterns or any pattern and if no match is found return what is found (keep in mind that duplicates are discarded in automatic mode)

Value

A vector of characters for matching_opt

See Also

import_parallel_Vispa2Matrices_auto

Other Import functions helpers: annotation_issues(), date_formats(), default_af_transform(), default_iss_file_prefixes(), quantification_types()

Examples

opts <- matching_options()

calabrialab/ISAnalytics documentation built on Nov. 2, 2023, 8:57 p.m.