unzip_file_system: A utility function to unzip and use example file systems...

In calabrialab/ISAnalytics: Analyze gene therapy vector insertion sites data identified from genomics next generation sequencing reads for clonal tracking studies

A utility function to unzip and use example file systems included in the package

Description

From ⁠ISAnalytics 1.5.4⁠ this function is defunct, since the package doesn't include example tabular files anymore. Use the function generate_default_folder_structure() to generate a default folder structure for running tests and play with the package import functions. If you don't need to test import functions, you can simply load package included data via data("integration_matrices") or data("association_file").

Usage

unzip_file_system(zipfile, name)

Arguments

zipfile	The zipped file to decompress
name	The name of the folder in the zipped archive ("fs" or "fserr")

Value

A path to reference

calabrialab/ISAnalytics documentation built on Nov. 2, 2023, 8:57 p.m.