computeSimPATHyParameters: Compute SimPATHy Parameters
In cavei/houseOfClipUtility: Clip Legacy Functions
Description
Usage
Arguments
Value
Description
Compute SimPATHy Parameters
Usage
1
2
computeSimPATHyParameters(chain, nodes, deInChain = NULL,
deInPath = NULL, augmentedMu = 2, strong = FALSE)
Arguments
chain
a chain o disregulation
nodes
all the other nodes
deInChain
the differentially expressed of the chain
deInPath
the differentially expressed in Pathway
augmentedMu
the magnetude of the mean inclement increment for DEGs
strong
should be the increment really marked
Value
a list with the parameters
path
the path
min
min
max
max
prob
prob
mu1
mu1
mu2
mu2
cavei/houseOfClipUtility documentation built on May 12, 2019, 5:23 p.m.
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Description Usage Arguments Value
Description
Compute SimPATHy Parameters
Usage
1 2 | computeSimPATHyParameters(chain, nodes, deInChain = NULL,
deInPath = NULL, augmentedMu = 2, strong = FALSE)
|
Arguments
chain |
a chain o disregulation |
nodes |
all the other nodes |
deInChain |
the differentially expressed of the chain |
deInPath |
the differentially expressed in Pathway |
augmentedMu |
the magnetude of the mean inclement increment for DEGs |
strong |
should be the increment really marked |
Value
a list with the parameters
path |
the path |
min |
min |
max |
max |
prob |
prob |
mu1 |
mu1 |
mu2 |
mu2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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