filterDirected: Filter direct edges

In cavei/houseOfClipUtility: Clip Legacy Functions

Description

Filter all directed edges

Usage

filterDirected(graph, reverse = FALSE)

createPath(graph, start, end, mode = "out")

fromChain2edgeList(chain)

Arguments

graph	a Pathway graph from graphite
reverse	invert selection
start	startig node
end	end node
mode	the direction to follow, out mean from source to dest
chain	vector of node names

Value

a Pathway with selected edges

edgeList

Examples

  if (require(graphite)) {
    p <- pathways("hsapiens", "kegg")[["Cell cycle"]]
    createPath(p, "ENTREZID:25", "ENTREZID:7029")
  }

cavei/houseOfClipUtility documentation built on May 12, 2019, 5:23 p.m.