adap.to.rc | adap.to.rc |
annotate | evaluate ramSearch, MSFinder mssearch, MSFinder Structure,... |
annotate.msfinder | annotate.msfinder |
annotate.msfinder.gcei | annotate.msfinder.gcei |
annotation.summary | annotation.summary() |
assign.z | assign.z |
build.lcms.library | lib.search |
change.annotation | evaluate ramSearch, MSFinder mssearch, MSFinder Structure,... |
classyfire.sunburst.plot | classyfire.sunburst.plot |
cmpd.summary | cmpd.summary |
degolm | convenient editing of ramclustObj sample names |
doFindmain | doFindmain |
editSampleNames | convenient editing of ramclustObj sample names |
export.msfinder.formulas | export MSFinder formula prediction results in tabular format. |
fooddb2msfinder | foodb2msfinder |
get.classyfire.local | get.classyfire.local |
getData | getData |
get.pubchem.annotations.all | get.pubchem.annotations.all |
getSmilesInchi | getSmilesInchi |
get.taxon.cids | get.taxon.cids |
golm.inchikey | retrieve inchikeys GOLM msp |
import.adap.kdb | import.adap.kdb |
import.msfinder.formulas | import.msfinder.formulas |
import.msfinder.mssearch | import.MSFinder.mssearch |
import.msfinder.structures | write.methods |
import.sirius | import.sirius |
impRamSearch | impRamSearch |
lib.search | lib.search |
make.zip.files | zip selected directories and move to 'report' directory. |
manual.annotation.template | manual.annotation.template |
normalize.intensity | lib.functions |
pmfanova | pmfanova |
pmfDefineExperiment | pmf.defineExperiment |
pmf.directory.report | returns a dataframe of all directories and their size in... |
pmfpca | pmfpca |
pmfxcms | pmfxcms |
pmfxcms.2 | pmfxcms |
pubchem.taxon.metabolome | pubchem.taxon.metabolome |
rc.cmpd.get.classyfire | getClassyFire |
rc.cmpd.get.pubchem | rc.cmpd.get.pubchem |
rc.cmpd.get.smiles.inchi | getSmilesInchi |
rc.run.msfinder | rc.run.msfinder |
reportSampleNames | convenient reporting of sample name and design |
startProject | startProject |
table.to.rc | table.to.rc |
write.file.summary | output file descriptions for reporting |
write.gcei.mat | write.gcei.mat |
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