read_reactions: Reads a list of reactions with optional annotations from a...
In cdiener/dycone: dycone - analyze the dynamic landscape of metabolome data
Description
Usage
Arguments
Value
Examples
Description
Reads a list of reactions with optional annotations from a file.
Usage
1
read_reactions(react_file)
Arguments
react_file
A csv file containing the reactions, where the first
column denotes the reaction string and additional columns contain
annotations. A single annotation can contain several values as a
comma separated string. The csv file should be saved with all entries
quoted.
Value
An object of with the S3 class reactions denoting a list
of reactions.
Examples
1
2
r_str <- "reaction,abbreviation,numbers\nA -> B,blub,\"1,2,3\"\nB <=>, bla, 3"
r <- read_reactions(textConnection(r_str))
cdiener/dycone documentation built on May 13, 2019, 2:41 p.m.
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Description Usage Arguments Value Examples
Description
Reads a list of reactions with optional annotations from a file.
Usage
1 | read_reactions(react_file)
|
Arguments
react_file |
A csv file containing the reactions, where the first column denotes the reaction string and additional columns contain annotations. A single annotation can contain several values as a comma separated string. The csv file should be saved with all entries quoted. |
Value
An object of with the S3 class reactions denoting a list
of reactions.
Examples
1 2 | r_str <- "reaction,abbreviation,numbers\nA -> B,blub,\"1,2,3\"\nB <=>, bla, 3"
r <- read_reactions(textConnection(r_str))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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