priority_mean: Extracts mean concentrations from HMDB results using a...
In cdiener/dycone: dycone - analyze the dynamic landscape of metabolome data
Description
Usage
Arguments
Value
See Also
Examples
Description
This is useful if one prefers concentrations from one biofluid, but will also
except other biofluids if no reported measurements can be found for the
primary one. priority_mean will return the mean of the first biofluid
for which measuremnts can be found.
Usage
1
priority_mean(d, biospecimen = c("cellular Cytoplasm", "blood"))
Arguments
d
A data frame as returned by hmdb_concentration
biospecimen
Vector of valid biospecimen to be checked in the order
they appear.
Value
The mean
See Also
hmdb_concentration to parse the concentrations used
in this function.
Examples
1
2
3
# requires internet connection
concs <- hmdb_concentration('HMDB0000124')
priority_mean(concs) # has measurements for cytoplasm so returns those
cdiener/dycone documentation built on May 13, 2019, 2:41 p.m.
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Description Usage Arguments Value See Also Examples
Description
This is useful if one prefers concentrations from one biofluid, but will also
except other biofluids if no reported measurements can be found for the
primary one. priority_mean will return the mean of the first biofluid
for which measuremnts can be found.
Usage
1 | priority_mean(d, biospecimen = c("cellular Cytoplasm", "blood"))
|
Arguments
d |
A data frame as returned by hmdb_concentration |
biospecimen |
Vector of valid biospecimen to be checked in the order they appear. |
Value
The mean
See Also
hmdb_concentration to parse the concentrations used
in this function.
Examples
1 2 3 | # requires internet connection
concs <- hmdb_concentration('HMDB0000124')
priority_mean(concs) # has measurements for cytoplasm so returns those
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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