Files in cdiener/dycone
dycone - analyze the dynamic landscape of metabolome data
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
Dockerfile
LICENSE
NAMESPACE
NEWS.md
R/RcppExports.R
R/data.R
R/kcone.R
R/linprog.R
R/minimal_perturbation.R
R/model_utility.R
R/ode.R
R/read_sbml.R
R/scraper.R
R/write_sbml.R
README.md
data/eryth.rda
dycone.Rproj
man/as.graph.Rd
man/as.reactions.Rd
man/as.stability.Rd
man/closest.Rd
man/constant_flux.Rd
man/constrain_by_Keq.Rd
man/deriv_ma.Rd
man/dycone.Rd
man/eigendynamics.Rd
man/enorm.Rd
man/eryth.Rd
man/fba.Rd
man/find_hmdb.Rd
man/fva.Rd
man/grapes-c-grapes.Rd
man/grep_id.Rd
man/hmdb_concentration.Rd
man/hmdb_parse_concentration.Rd
man/hmdb_parse_xml.Rd
man/hyp.Rd
man/inside.Rd
man/jacobian.Rd
man/kcone.Rd
man/kcone_null.Rd
man/ma_terms.Rd
man/make_irreversible.Rd
man/mass_action.Rd
man/minimal_perturbation.Rd
man/minimal_perturbation_lp.Rd
man/occupation.Rd
man/parse_conc.Rd
man/patch.Rd
man/pfba.Rd
man/plot.reactions.Rd
man/plot_basis.Rd
man/plot_red.Rd
man/polytope_basis.Rd
man/print.reactions.Rd
man/priority_mean.Rd
man/r_order.Rd
man/read_reactions.Rd
man/read_sbml.Rd
man/rp.Rd
man/sbml_params.Rd
man/sbml_reactions.Rd
man/sbml_species.Rd
man/single_hyp.Rd
man/species.Rd
man/stability_analysis.Rd
man/stoichiometry.Rd
man/timecourse.Rd
man/which_reaction.Rd
src/.gitignore
src/Makevars
src/RcppExports.cpp
src/fba.cpp
src/fva.cpp
src/min_pertub.cpp
src/pfba.cpp
stuff/logo.png
stuff/logo.svg
tests/testthat.R
tests/testthat/test_kcone.R
tests/testthat/test_min_perturb.R
tests/testthat/test_ode.R
tests/testthat/test_opt.R
tests/testthat/test_sbml.R
tests/testthat/test_scraper.R
tests/testthat/test_utilities.R
vignettes/eryth.Rmd
wercker.yml
