API for chandlerzuo/atSNP
Affinity test for identifying regulatory SNPs
| Global functions | |
|---|---|
| .find_reverse | Source code |
| CheckSameLength | Source code |
| ComputeMotifScore | Man page Source code |
| ComputePValues | Man page Source code |
| GetIUPACSequence | Man page Source code |
| LoadFastaData | Man page Source code |
| LoadMotifLibrary | Man page Source code |
| LoadSNPData | Man page Source code |
| MatchSubsequence | Man page Source code |
| atSNP-package | Man page |
| checkMotifs | Source code |
| checkSNPids | Source code |
| comp_indel_mat_d | Man page Source code |
| dtMotifMatch | Man page Source code |
| encode_motif | Man page |
| encode_motifinfo | Man page |
| jaspar_motif | Man page |
| jaspar_motifinfo | Man page |
| match_subseq_par | Source code |
| motif_library | Man page |
| motif_match | Man page |
| motif_score_par | Source code |
| motif_scores | Man page |
| myStrSplit | Source code |
| p_values_for_motif | Man page Source code |
| plotMotifMatch | Man page Source code |
| prior | Man page |
| pval_with_less_var | Man page Source code |
| snpInfo | Man page |
| snp_tbl | Man page |
| transition | Man page |
