snpInfo: A data set for SNP information.
In chandlerzuo/atSNP: Affinity test for identifying regulatory SNPs
Description
This list object loaded by 'data(example)' contains three fields
:
sequence_matrix A sequence matrix, coded by 1-A, 2-C, 3-G, 4-T, with
each column corresponding to a subsequence of 61 bp around one SNP.
transition The transition matrix used in Markov model.
prior The stationary distribution used in the Markov model.
Format
A list object.
Author(s)
Sunyoung Shin sunyoung.shin@utdallas.edu, Chandler Zuo
chandler.c.zuo@gmail.com
chandlerzuo/atSNP documentation built on Oct. 31, 2020, 4:33 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
This list object loaded by 'data(example)' contains three fields :
| sequence_matrix | A sequence matrix, coded by 1-A, 2-C, 3-G, 4-T, with each column corresponding to a subsequence of 61 bp around one SNP. |
| transition | The transition matrix used in Markov model. |
| prior | The stationary distribution used in the Markov model. |
Format
A list object.
Author(s)
Sunyoung Shin sunyoung.shin@utdallas.edu, Chandler Zuo chandler.c.zuo@gmail.com
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.