Description Details Author(s) References
The main functions provided by the tools are : getVariantAlleleInfo
, getLFRset
and getPhasingInfo
The package include experimental data retrieved from a study conducted in the Ovarian Cancer Lab of the University of Oxford.
For more detailed information on usage, see the package vignette, by typing
vignette('DigitalPicoTools')
. All support questions should be emailed to the authors.
Donatien Chedom-Fotso, Ahmed Ahmed, Christopher Yau,
DigitalPicoTools references:
OncoPhase: A package for computing Somatic Mutation cellular Prevalence in cancer using haplotype phasing. Bioinformatics 2016. Submitted
DigitalPicoTools reference (Paper):
Ovarian cancer haplotype sequencing reveals ubiquitous SOX2 overexpression in the premalignant fallopian tube epithelium
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