getBreadthGenomeCoverage-methods: Retrieves the fraction of the whole genomes covered by the...
In chedonat/DigitalPicoTools: DIGITAL ANALYSIS OF PICOGRAM QUANTITIES OF DNA

Description Usage Arguments Value See Also Examples

Retrieves the fraction of the whole genomes covered by the Long fragments Reads making the LFRset

1	getBreadthGenomeCoverage(object)

`x`	an object of class `LFRset`

If a single well, a numeric value representing the breadth coverage of its LFRs. If multiple wells, the methods output a data.frame containing the breadth coverage per wells.

getN50, getLFRStats, getLFRStatsPerWell, summary.LFRset

#Loading an object of class (LFRset)
data(FiveWellsLFRset)
P009_LFR=getWellLFRset(FiveWellsLFRset,'P009')
print(getBreadthGenomeCoverage(P009_LFR))
# 4.63
print(getBreadthGenomeCoverage(FiveWellsLFRset))
# Wells BreadthCoverage
# 1  A005            7.22
# 2  A016            1.91
# 3  L006            3.69
# 4  L024            2.76
# 5  P009            4.63