map_mask: find the next most significant SNP, masking a list of sigsnps

Description Usage Arguments Value Author(s)

Description

Internal helper function for finemap.signals

Usage

1
map_mask(D, LD, r2thr = 0.01, sigsnps = NULL)

Arguments

D

dataset in standard coloc format

LD

named matrix of r

r2thr

mask all snps with r2 > r2thr with any in sigsnps

sigsnps

names of snps to mask

Value

named numeric - Z score named by snp

Author(s)

Chris Wallace


chr1swallace/coloc documentation built on June 10, 2021, 8:38 p.m.