Files in chris-hsiung/bears01
What the Package Does (One Line, Title Case)
.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/.DS_Store
R/RNAfold2df.R
R/assembleCas9DualgRNALibraryOligo.R
R/calculate_quantilethresperc.R
R/clean_name.R
R/copy_to_global.R
R/countBlpI.R
R/countBsmBI.R
R/countBstXI.R
R/fasta2df.R
R/fasta2targetsites.R
R/flowjo2df.R
R/getBestCRISPickSpacers.R
R/getBothStrandsFASTA.R
R/getCas9gRNAoligos_BstxIBlpI.R
R/getGammaScore.R
R/getHumanBiomaRt.R
R/getLibraryOligoCas12a6plexgRNA.R
R/getLibraryOligoCas12aSinglegRNA.R
R/getLibraryOligoCas12aTriplegRNA.R
R/getLibraryoligoCas12aDoublegRNA.R
R/getOligosCas12a4plexgRNAVariantDR_BsmbI.R
R/getOligosCas12a5plexgRNAVariantDR_BsmbI.R
R/getOligosCas12a6plexgRNAVariantDR_BsmbI.R
R/getOligosCas12aDualgRNA_BsmbI.R
R/getOligosCas12aSinglegRNA_BsmbI.R
R/getOligosCas12aTriplegRNALbDR_BsmbI.R
R/getOligosCas12aTriplegRNAVariantAsDR_BsmbI.R
R/getReverseComplement.R
R/getSpacersforGeneByRank.R
R/getTargetSites.R
R/gethammingdist.R
R/plothalfviolin_withFC.R
R/plothalfviolin_withthres.R
R/plotscatter_withthres.R
R/plotsplitviolin_withthres.R
R/processFlowjoExportDir.R
R/propensityscore_multimatch.R
R/proptestfordf.R
R/removeBadCRISPickSpacers.R
R/subsample_groupeddf.R
R/ttestfordf.R
R/wilcoxtestfordf.R
R/writedf2fasta.R
README.md
bears01.Rproj
man/RNAfold2df.Rd
man/assembleCas9DualgRNALibraryOligo.Rd
man/calculate_quantilethresperc.Rd
man/clean_name.Rd
man/copy_to_global.Rd
man/countBlpI.Rd
man/countBsmBI.Rd
man/countBstXI.Rd
man/fasta2df.Rd
man/fasta2targetsites.Rd
man/flowjo2df.Rd
man/getBestCRISPickSpacers.Rd
man/getBothStrandsFASTA.Rd
man/getCas9gRNAoligos_BstxIBlpI.Rd
man/getGammaScore.Rd
man/getHumanBiomaRt.Rd
man/getLibraryOligoCas12a6plexgRNA.Rd
man/getLibraryOligoCas12aDoublegRNA.Rd
man/getLibraryOligoCas12aSinglegRNA.Rd
man/getLibraryOligoCas12aTriplegRNA.Rd
man/getOligosCas12a4plexgRNAVariantDR_BsmbI.Rd
man/getOligosCas12a5plexgRNAVariantDR_BsmbI.Rd
man/getOligosCas12a6plexgRNAVariantDR_BsmbI.Rd
man/getOligosCas12aDualgRNA_BsmbI.Rd
man/getOligosCas12aSinglegRNA_BsmbI.Rd
man/getOligosCas12aTriplegRNALbDR_BsmbI.Rd
man/getOligosCas12aTriplegRNAVariantAsDR_BsmbI.Rd
man/getReverseComplement.Rd
man/getSpacersForGeneByRank.Rd
man/getTargetSites.Rd
man/gethammingdist.Rd
man/plothalfviolin_withthres.Rd
man/plotscatter_withthres.Rd
man/plotsplitviolin_withthres.Rd
man/processFlowjoExportDir.Rd
man/propensityscore_multimatch.Rd
man/proptestfordf.Rd
man/removeBadCRISPickSpacers.Rd
man/subsample_groupeddf.Rd
man/ttestfordf.Rd
man/wilcoxtestfordf.Rd
man/writedf2fasta.Rd
manualinspection/test-getLibraryOligoCas12a6plexgRNA.dna
manualinspection/test-getLibraryOligoCas12aDoublegRNA.dna
tests/testthat.R
tests/testthat/test-getLibraryOligoCas12a6plexgRNA.R
tests/testthat/test-getLibraryOligoCas12aDoublegRNA.R
tests/testthat/test-getLibraryOligoCas12aSinglegRNA.R
tests/testthat/test-getLibraryOligoCas12aTriplegRNA.R
