getSpacersForGeneByRank: for given gene retrieve top rows corresponding to (number of...

In chris-hsiung/bears01: What the Package Does (One Line, Title Case)

for given gene retrieve top rows corresponding to (number of rows specified by numbertoget) after sorting by any numerical score in rankcol libdf can be any data frame (each row is a sgRNA protospacer sequence) that contains columns specified by the other input arguments

Description

for given gene retrieve top rows corresponding to (number of rows specified by numbertoget) after sorting by any numerical score in rankcol libdf can be any data frame (each row is a sgRNA protospacer sequence) that contains columns specified by the other input arguments

Usage

getSpacersForGeneByRank(
  gene,
  libdf,
  numbertoget,
  rankcol = "selection rank",
  genecol = "gene",
  spacercol = "protospacer sequence"
)

Value

dataframe with picked rows with additional pickrank column to indicate rank after sorting by rankcol

chris-hsiung/bears01 documentation built on April 9, 2024, 2:01 a.m.