integrityPlot: Generate cluster integrity plot.

In clajusch/ClEvaR: Cluster Evaluation in R

Description

A Granularity vs. Integrity scatterplot.

Usage

integrityPlot(subject, query)

Arguments

subject	Vector of reference cluster assignments.
query	Vector of cluster assignments for comparison with reference.

Value

A ggplot object.

Examples

a = c(rep("A", 1000), rep("B", 100), rep("C", 10))
b = c(rep("A", 500), rep("B", 595), rep("C", 15))
integrityPlot(a, b)

data(zeisel2018)
integrityPlot(subject = zeisel2018$cell_metadata$class,
              query = zeisel2018$cell_metadata$cluster_name)

clajusch/ClEvaR documentation built on May 9, 2019, 4:55 a.m.