sim_schisto_stoch_mod: Simulate the stochastic version of age-stratified...

In cmhoove14/DDNTD: Density Dependence in Neglected Tropical Diseases

Description

Uses the 'schisto_stoch_mod' function to simulate the stochastic model through time

Usage

sim_schisto_stoch_mod(nstart, transitions = list(c(S = 1), c(S = -1), c(S
  = -1, E = 1), c(E = -1), c(E = -1, I = 1), c(I = -1), c(Wt = 1), c(Wu =
  1), c(Wt = -1), c(Wu = -1)), sfx = schisto_stoch_mod, params, tf,
  events_df = NA)

Arguments

nstart	starting values of state variables, must be whole numbers
transitions	list of all possible transitions between state variables, defaults to transitions possible in 'schisto_stoch_mod'
sfx	function to feed into adaptive tau, uses 'schisto_stoch_mod' as default
params	named vector of parameter values used in model
tf	numeric of total time to run simulation
events_df	Data frame of events such as MDA with columns "var", "time", "value", and "method"

Value

matrix of state variables and values at time points up until tf

cmhoove14/DDNTD documentation built on Nov. 23, 2019, 7:04 p.m.