RunJitter: RunJitter

In cmlegault/ASAPplots: Creates Standard Plots and PDFs for ASAP3

Description

Run ASAP a number of times from different initial guesses.

Usage

RunJitter(
  wd,
  asap.name,
  njitter,
  ploption = "jitter",
  save.plots = TRUE,
  od = paste0(wd, "\\jitter\\"),
  plotf = "png",
  showtitle = FALSE,
  copy_std_cor_flag = FALSE
)

Arguments

wd	directory where ASAP run is located
asap.name	Base name of original dat file (without the .dat extension)
njitter	number of realizations to run with different initial guesses
ploption	"full" selects initial guesses from full range of possible values, "jitter" uses SS3.30 approach to select values close to parameter estimates (defaults to "jitter")
save.plots	saves indivdual plots (defaults to TRUE)
od	location where plot is saved (defaults to jitter subdirectory of wd)
plotf	format for individual plots (defaults to 'png')
showtitle	option to include title of numeric results on objective function plot (defaults to FALSE)
copy_std_cor_flag	option to save .std and .cor files for each jitter run (defaults to FALSE)

cmlegault/ASAPplots documentation built on March 29, 2021, 8:28 p.m.