documentation_rank.NULL: documentation_rank.NULL

In cmmr/rbiom: Read/Write, Analyze, and Visualize 'BIOM' Data

documentation_rank.NULL

Description

documentation_rank.NULL

Arguments

rank

What rank(s) of taxa to compute biplot coordinates and statistics for, or NULL to disable. E.g. "Phylum", "Genus", ".otu", etc. An integer vector can also be given, where 1 is the highest rank, 2 is the second highest, -1 is the lowest rank, -2 is the second lowest, and 0 is the OTU "rank". Run biom$ranks to see all options for a given rbiom object. Default: NULL.

cmmr/rbiom documentation built on April 28, 2024, 6:38 a.m.