filter_IBRAP: Filters object according to cell metadata
In connorhknight/IBRAP: Integrated Benchmarking scRNA-seq Analytical Pipeline (IBRAP)
filter_IBRAP R Documentation
Filters object according to cell metadata
Description
Filters cells according to thresholds applied in the columns of object@metadata
Usage
filter_IBRAP(assay = counts, ... = RAW_total.features < max.features & RAW_total.counts > 200 & RAW_percent.mt < 8)
Arguments
...
assay
IBRAP class object
Value
Filtered IBRAP object
connorhknight/IBRAP documentation built on March 9, 2023, 7:01 p.m.
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| filter_IBRAP | R Documentation |
Filters object according to cell metadata
Description
Filters cells according to thresholds applied in the columns of object@metadata
Usage
filter_IBRAP(assay = counts, ... = RAW_total.features < max.features & RAW_total.counts > 200 & RAW_percent.mt < 8)
Arguments
... |
|
assay |
IBRAP class object |
Value
Filtered IBRAP object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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