AssignHighestJaccard: Assign highest Jaccard index for each cluster of the...

In crazyhottommy/scclusteval: Evaluate the single cell clustering

Description

Assign highest Jaccard index for each cluster of the subsampled data set before reclustering with the cluster identites of subsampled data set after reclustering

Usage

AssignHighestJaccard(idents1, idents2)

Arguments

idents1	A list of cluster identity copied from the orginal data sets. idents1 is a list of the cluster identity from the subsampled data sets before reclustering.
idents2	A list of cluster identity from the subsampled data sets. idents2 is a list of the cluster identity from the subsampled data sets after reclustering. The order of identities in idents1 and idents2 should correspond to each other.

Value

A matrix with dimention of #number of subsampling * #number of clusters in the original data set.

crazyhottommy/scclusteval documentation built on Aug. 5, 2021, 3:20 p.m.