PairWiseJaccardSets: Calculate pair-wise Jaccard distance for @ident slots from...

In crazyhottommy/scclusteval: Evaluate the single cell clustering

Description

Calculate pair-wise Jaccard distance for two named factor vector. e.g. seurat_obj1@ident and seurat_obj2@ident

Usage

PairWiseJaccardSets(ident1, ident2)

Arguments

ident1	a named factor vector. names are the cell names, the values are the cluster id.
ident2	a named factor vector. names are the cell names, the values are the cluster id.

Value

a matrix of pair-wise Jaccard distance. Rows are clusters from ident1, columns are clusters from ident2

Examples

## Not run: 
PairWiseJaccardSets(pbmc@ident, pbmc_small@ident)

## End(Not run)

crazyhottommy/scclusteval documentation built on Aug. 5, 2021, 3:20 p.m.