phyloCompDataFromCompData: Create a 'phyloCompData' object
In csoneson/compcodeR: RNAseq data simulation, differential expression analysis and performance comparison of differential expression methods
phyloCompDataFromCompData R Documentation
Create a phyloCompData object
Description
The phyloCompData class extends the compData class
with sequence length and phylogeny related information.
Usage
phyloCompDataFromCompData(
compDataObject,
tree = list(),
length.matrix = matrix(NA_integer_, 0, 0)
)
Arguments
compDataObject
An object of class compData.
tree
A phylogenetic tree describing the relationships between samples.
length.matrix
A length matrix, with genes as rows and observations as columns.
Value
A phyloCompData object.
Author(s)
Charlotte Soneson, Paul Bastide
csoneson/compcodeR documentation built on Nov. 3, 2024, 6:05 a.m.
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| phyloCompDataFromCompData | R Documentation |
Create a phyloCompData object
Description
The phyloCompData class extends the compData class
with sequence length and phylogeny related information.
Usage
phyloCompDataFromCompData(
compDataObject,
tree = list(),
length.matrix = matrix(NA_integer_, 0, 0)
)
Arguments
compDataObject |
An object of class |
tree |
A phylogenetic tree describing the relationships between samples. |
length.matrix |
A length matrix, with genes as rows and observations as columns. |
Value
A phyloCompData object.
Author(s)
Charlotte Soneson, Paul Bastide
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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