genomes-plot: Genome table plots by release date

In cstubben/genomes2: Genome sequencing project metadata

Description

Generic function for plotting the cumulative number of genomes by released date for genome tables

Usage

## S3 method for class 'genomes'
plot(x, subset,  
 xlab, ylab ="Genomes",
 type= "l", col = "blue", ...)

Arguments

x	a genomes data frame with class 'genomes'
subset	logical vector indicating rows to keep
xlab	x-axis label, default is date column name
ylab	y-axis label
type	type of plot, default is a blue line
col	color
...	additional arguments passed to plot

Details

Requires a released, created or submitted date column (and plots first column found)

Value

A plot of the cumulative total of genomes by release date.

Author(s)

Chris Stubben

See Also

plotby to plot release dates by any grouping column

Examples

data(proks)
plot(proks)
plot(proks, name %like% 'Yersinia*', ylab="Yersinia genomes")

cstubben/genomes2 documentation built on May 14, 2019, 12:25 p.m.