selectNodes: Select nodes

In cytoscape/r2cytoscape: Functions for Cytoscape Automation

Description

Select nodes based on name, SUID or any other column.

Usage

selectNodes(nodes, by.col = "name", keep.selected = FALSE,
  network = "current", base.url = "http://localhost:1234/v1")

Arguments

nodes	a list of nodes that you want to select
by.col	column by which to perform selection (e.g., SUID, name); default is "name"
keep.selected	(boolean) whether to add to existing selection (TRUE) or clear prior selection (FALSE); default is FALSE
network	name or suid of the network; default is "current" network
base.url	cyrest base url for communicating with cytoscape

Value

list of SUIDs for nodes selected, excluding those that did not match provided list and those previously selected (even if keep.selected=TRUE)

Examples

example(createNetwork)

selectNodes(c('node 0','node 1'))
selectNodes('B', by.col='group')

cytoscape/r2cytoscape documentation built on May 4, 2019, 6:36 p.m.