called_by_n_callers: Function to identify fusions called by at least n callers

Description Usage Arguments Value Examples

View source: R/called_by_n_callers.R

Description

Function to identify fusions called by at least n callers

Usage

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called_by_n_callers(standardFusioncalls, numCaller)

Arguments

standardFusioncalls

A dataframe from star fusion or arriba standardized to run through the filtering steps

numCaller

Least number of callers that have the fusion

Value

Fusions called by n callers

Examples

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out_annofuse <- system.file("extdata", "PutativeDriverAnnoFuse.tsv", package = "annoFuseData")
sfc <- read.delim(out_annofuse)
sfc_called <- called_by_n_callers(sfc, numCaller = 2)

d3b-center/annoFuse documentation built on March 11, 2021, 9:05 p.m.