Files in dankelley/argoFloats
Analysis of Oceanographic Argo Floats

.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/auto-assign-to-project.yml
.github/workflows/pkgdown.yaml
.github/workflows/stale.yml
.github/workflows/test-coverage.yaml
.gitignore
CODE_OF_CONDUCT.md
DESCRIPTION
NAMESPACE
NEWS.md
R/.gitignore
R/AllClass.R R/adjusted.R R/debug.R R/defaults.R R/download.R R/extdata.R R/get.R R/mapApp.R R/merge.R R/misc.R R/plot.R R/qc.R R/read.R R/show.R R/subset.R R/summary.R README.R README.Rmd README.md
_pkgdown.yml
appveyor.yml
argoFloats.Rproj
cran-comments.md
create_data/.gitignore
create_data/Makefile
create_data/README.md
create_data/SR2902204_131.nc
create_data/check_index.R create_data/create_argo_01.R create_data/create_index.R create_data/create_indexBgc.R create_data/create_indexDeep.R create_data/create_indexMerged.R create_data/create_indexSynthetic.R create_data/create_profiles.R
data/index.rda
data/indexBgc.rda
data/indexDeep.rda
data/indexSynthetic.rda
exampleTS.png
inst/WORDLIST
inst/extdata/D4900785_048.nc
inst/extdata/R3901602_163.nc
inst/extdata/SD5903586_001.nc
inst/extdata/SR2902204_131.nc
inst/shiny/mapApp/app.R
inst/shiny/mapApp/www/pch_gallery.png
issues/.gitignore
issues/0xx/082/82a.R issues/0xx/086/05_issue86a.R issues/0xx/086/05_issue86b.R issues/0xx/086/05_issue86c.R issues/0xx/086/05_issue86d.R
issues/0xx/086/d
issues/0xx/086/test_data.rda
issues/1xx/100/100a.R issues/1xx/100/100b.R
issues/1xx/100/Makefile
issues/1xx/103/103.R
issues/1xx/103/Makefile
issues/1xx/104/104a.R
issues/1xx/104/Makefile
issues/1xx/136/136a.R
issues/1xx/136/Makefile
issues/1xx/142/142a.R
issues/1xx/142/Makefile
issues/1xx/174/174a.R
issues/1xx/174/Makefile
issues/1xx/177/177.R
issues/1xx/177/Makefile
issues/1xx/Makefile
issues/2xx/227/227.R
issues/2xx/227/Makefile
issues/2xx/228/228.R
issues/2xx/228/Makefile
issues/2xx/241/241.R
issues/2xx/241/Makefile
issues/2xx/241/Rplots.pdf issues/2xx/298/issue298.R issues/4xx/413/413a.R issues/4xx/413/413b.R
issues/4xx/413/BD6901494_352.nc
issues/4xx/413/BD6901494_352D.nc
issues/4xx/413/D4901052_069.nc
issues/4xx/413/D5901602_157.nc
issues/4xx/413/Makefile
issues/4xx/413/README.md issues/4xx/413/parameter_oddness.R issues/4xx/414/414a.R
issues/4xx/414/Makefile
logo/README.md
logo/argoFloats_logo_06.png
logo/logo.R
logo/topo_81W_72W_22N_31N_1min_gmt.nc
man-roxygen/age.R man-roxygen/debug.R man-roxygen/destdir.R man-roxygen/destfile.R man-roxygen/force.R man-roxygen/mode.R man-roxygen/quiet.R man-roxygen/retries.R man-roxygen/server.R man-roxygen/server_caveat.R man-roxygen/silent.R man-roxygen/skip.R man-roxygen/url.R man/D4900785_048.nc.Rd man/R3901602_163.nc.Rd man/SD5903586_001.nc.Rd man/SR2902204_131.nc.Rd man/applyQC.Rd man/argoDefaultDestdir.Rd man/argoFloats-class.Rd man/argoFloats-methods.Rd man/argoFloats-package.Rd man/argoFloatsDebug.Rd man/argoFloatsGetFromCache.Rd man/argoFloatsIsCached.Rd man/argoFloatsStoreInCache.Rd man/downloadWithRetries.Rd
man/figures/README-unnamed-chunk-4-1.png
man/figures/workflow.R
man/figures/workflow.png
man/getIndex.Rd man/getProfileFromUrl.Rd man/getProfiles.Rd man/hexToBits.Rd man/index.Rd man/indexBgc.Rd man/indexDeep.Rd man/indexSynthetic.Rd man/mapApp.Rd man/merge-argoFloats-method.Rd man/plot-argoFloats-method.Rd man/readProfiles.Rd man/showQCTests.Rd man/sub-sub-argoFloats-method.Rd man/subset-argoFloats-method.Rd man/summary-argoFloats-method.Rd man/useAdjusted.Rd
pkgdown/favicon/favicon.ico
sandbox/.gitignore
sandbox/cran_submission/changes_for_cran_comments.md sandbox/cran_submission/review01.md sandbox/cran_submission/review01_and_reply.md sandbox/cran_submission/review02.md
sandbox/dek/.gitignore
sandbox/dek/01_merged_files/.gitignore
sandbox/dek/01_merged_files/01.R sandbox/dek/02_workflow/workflow.R
sandbox/dek/02_workflow/workflow.png
sandbox/dek/03_by_ocean/03_by_ocean.R sandbox/dek/03_by_ocean/03_by_ocean_setup.R
sandbox/dek/03_by_ocean/b
sandbox/dek/04_wgc/04_wgc.R
sandbox/dek/05_hex_logo/Makefile
sandbox/dek/05_hex_logo/README.md sandbox/dek/05_hex_logo/Rplots.pdf sandbox/dek/05_hex_logo/argoFloats_logo_01.R sandbox/dek/05_hex_logo/argoFloats_logo_02.R sandbox/dek/05_hex_logo/argoFloats_logo_03.R sandbox/dek/05_hex_logo/argoFloats_logo_04.R sandbox/dek/05_hex_logo/argoFloats_logo_05.R sandbox/dek/05_hex_logo/argoFloats_logo_06.R sandbox/dek/05_hex_logo/get_topo.R sandbox/dek/05_hex_logo/test_bathy_colorscheme.R
sandbox/dek/05_hex_logo/topo_81W_72W_22N_31N_1min_gmt.nc
sandbox/dek/06_name_icon/zoom_name.R sandbox/dek/07_trajectory/07_trajectory_speed.R sandbox/dek/07_trajectory/07_trajectory_time.R
sandbox/dek/07_trajectory/Makefile
sandbox/dek/08_oxygen/08_oxygen_1.R
sandbox/dek/08_oxygen/Makefile
sandbox/dek/09_adjust/09_adjust_01.R sandbox/dek/09_adjust/09_adjust_02.R sandbox/dek/09_adjust/09_adjust_03.R sandbox/dek/09_adjust/09_adjust_04.R sandbox/dek/09_adjust/09_adjust_05.R sandbox/dek/09_adjust/09_adjust_06.R
sandbox/dek/09_adjust/Makefile
sandbox/dek/09_adjust/README.md sandbox/dek/10_gridded/10_gridded_01.R
sandbox/dek/10_gridded/Makefile
sandbox/dek/11_argovis/.gitignore
sandbox/dek/11_argovis/11_argovis_01.R sandbox/dek/11_argovis/11_argovis_02.R
sandbox/dek/11_argovis/Makefile
sandbox/dek/11_argovis/README.md
sandbox/dek/12_edit/.gitignore
sandbox/dek/12_edit/12_edit.R
sandbox/dek/12_edit/Makefile
sandbox/dek/13_useBest/13_useBest_01.R
sandbox/dek/13_useBest/13_useBest_01.txt
sandbox/dek/13_useBest/13_useBest_02_a.Rmd sandbox/dek/13_useBest/13_useBest_02_b.Rmd sandbox/dek/13_useBest/13_useBest_03.R
sandbox/dek/13_useBest/Makefile
sandbox/dek/13_useBest/README.md sandbox/dek/13_useBest/method.md
sandbox/dek/14_towards_cran/Makefile
sandbox/dek/14_towards_cran/test_20210808.Rmd
sandbox/dek/15_pch_gallery/Makefile
sandbox/dek/15_pch_gallery/pch_gallery.R
sandbox/dek/16_finer_topo/.gitignore
sandbox/dek/16_finer_topo/Makefile
sandbox/dek/16_finer_topo/create_topoWorld.R sandbox/dek/README.md
sandbox/jlh/.gitignore
sandbox/jlh/01_Vingette/01_ideas_for_argoFloats_vingette.Rmd
sandbox/jlh/01_Vingette/bermudaprofile.png
sandbox/jlh/01_Vingette/workflow.png
sandbox/jlh/02_Logo/.RData
sandbox/jlh/02_Logo/01_Logo.R sandbox/jlh/02_Logo/01_location.R sandbox/jlh/02_Logo/06_logo.R sandbox/jlh/02_Logo/07_logo.R sandbox/jlh/02_Logo/08_logo.R
sandbox/jlh/02_Logo/Makefile
sandbox/jlh/02_Logo/argoFloats_logo_03.png
sandbox/jlh/02_Logo/argoPractice.png
sandbox/jlh/02_Logo/practice.png
sandbox/jlh/03_parameterSubset/paramSubset.R sandbox/jlh/04_polygonSubset/polygonSubset.R sandbox/jlh/05_argoDeep/01_argoDeep.R sandbox/jlh/06_floatID/floatID.R sandbox/jlh/07_DuplicateProfiles/duplicateProfiles.R
sandbox/jlh/08_polygonPlot/.gitignore
sandbox/jlh/08_polygonPlot/polygonPlot.R sandbox/jlh/09_PanamaOxygen/panamaOxygen.R
sandbox/jlh/10_TrajectoryPlot/Makefile
sandbox/jlh/10_TrajectoryPlot/trajectory.R sandbox/jlh/11_Videos/video06/video06.R
sandbox/jlh/11_Videos/video07/Makefile
sandbox/jlh/11_Videos/video07/video07.R sandbox/jlh/12_Diagnostics/diagnostics.R sandbox/jlh/13_SyntheticFlags/adjustedData.R sandbox/jlh/13_SyntheticFlags/syntheticFlags.R sandbox/jlh/14_RealtimeOxy/realVSdelayed.R sandbox/jlh/14_RealtimeOxy/realtimeOxy.R sandbox/jlh/15_FlagMarkdown/flag.Rmd sandbox/jlh/16_Hypothesis/hypothesis.R sandbox/jlh/17_qcFunction/qcFunction.R sandbox/jlh/17_qcFunction/qcFunction_DK.R
sandbox/jlh/18_tweets/.gitignore
sandbox/jlh/18_tweets/142a.png
sandbox/jlh/18_tweets/Makefile
sandbox/jlh/18_tweets/TS.R
sandbox/jlh/18_tweets/TS.png
sandbox/jlh/18_tweets/TScode.png
sandbox/jlh/18_tweets/TSoxygen.R
sandbox/jlh/18_tweets/TSoxygen.png
sandbox/jlh/18_tweets/TSoxygenCode.png
sandbox/jlh/18_tweets/TSpanama.R
sandbox/jlh/18_tweets/TSpanama.png
sandbox/jlh/18_tweets/TSpanamaCode.png
sandbox/jlh/18_tweets/applyQCCode.png
sandbox/jlh/18_tweets/argoFloats_logo_06.png
sandbox/jlh/18_tweets/bathymetry.R
sandbox/jlh/18_tweets/bathymetry.png
sandbox/jlh/18_tweets/bathymetryCode.png
sandbox/jlh/18_tweets/dataStateIndicatorCode.png
sandbox/jlh/18_tweets/flowchart.R
sandbox/jlh/18_tweets/flowchart.png
sandbox/jlh/18_tweets/mapApp.png
sandbox/jlh/18_tweets/oceanArea.R
sandbox/jlh/18_tweets/oceanArea.png
sandbox/jlh/18_tweets/oceanAreaCode.png
sandbox/jlh/18_tweets/plotQCCode.png
sandbox/jlh/18_tweets/qcFlowchart.png
sandbox/jlh/18_tweets/qc_flowchart.R
sandbox/jlh/18_tweets/showQCTestOutput.png
sandbox/jlh/18_tweets/showQCTests.R
sandbox/jlh/18_tweets/showQCTestsCode.png
sandbox/jlh/18_tweets/tweetThread.Rmd sandbox/jlh/18_tweets/useAdjusted.R
sandbox/jlh/18_tweets/useAdjusted.png
sandbox/jlh/18_tweets/useAdjustedCode.png
sandbox/jlh/18_tweets/useAdjustedDiagram.png
sandbox/jlh/19_profileAnalysis/01.R sandbox/jlh/21_badDates/badDates.R sandbox/jlh/22_indexDeep/indexDeep.R sandbox/jlh/23_useAdjustedDiagram/03_diagram.R
sandbox/jlh/23_useAdjustedDiagram/Makefile
sandbox/jlh/23_useAdjustedDiagram/diagram.R sandbox/jlh/23_useAdjustedDiagram/diagramNew.R sandbox/jlh/24_video8/video8.R sandbox/jlh/25_useAdjusted/useAdjusted.R sandbox/jlh/26_potentialDensity/potentialDensity.R sandbox/jlh/27_cycleParameter/cycleParameter.R sandbox/jlh/28_plotProfile/dek01.R sandbox/jlh/28_plotProfile/hey.R sandbox/jlh/28_plotProfile/plotProfile.R sandbox/jlh/29_currentSpeed/currentSpeed.R sandbox/jlh/30_oddCycle/oddCycle.R sandbox/jlh/31_dataStateIndicator/dataStateIndicator.R sandbox/jlh/33_section_argo/01_section_argo.R sandbox/jlh/34_mapScale/01_mapScalebar.R
sandbox/jlh/35_profvis/Makefile
sandbox/jlh/35_profvis/profiling.Rmd sandbox/jlh/36_IP_accessor/ip_accessor.R sandbox/jlh/37_useAdjustedNew/01_useAdjustedNew.R sandbox/jlh/38_qcApp/qcApp.R tests/testthat.R
tests/testthat/.gitignore
tests/testthat/test_accessors.R tests/testthat/test_adjusted_bgc.R tests/testthat/test_adjusted_core.R tests/testthat/test_datasets.R tests/testthat/test_debug.R tests/testthat/test_defaults.R tests/testthat/test_download.R tests/testthat/test_hex.R tests/testthat/test_merge.R tests/testthat/test_plot.R tests/testthat/test_qc.R tests/testthat/test_read.R tests/testthat/test_show.R tests/testthat/test_subset.R tests/testthat/test_summary.R
videos/.gitignore
videos/02/title_slide.Rmd
videos/02/title_slide.png
videos/02/video02.R videos/04/video04_subset_by_ocean.R videos/04/video04_subset_by_polygon.R videos/05/video05_TS_by_oxygen.R videos/06/decription.Rmd videos/06/video06_trajectory_by_time.R videos/07/decription.Rmd videos/07/video07_map_with_bathymetry.R videos/08/Rplots.pdf videos/08/decription.Rmd videos/08/video08_qc_intro.R videos/09/decription.Rmd videos/09/video09_qc_advanced.R videos/10/decription.Rmd videos/10/video10_useAdjusted.R videos/11/decription.Rmd videos/12/decription.Rmd videos/12/video12_dataStateIndicator.R
videos/README.html
videos/README.md videos/tags.md
vignettes/.gitignore
vignettes/01_section_argo.png
vignettes/applyQC.R
vignettes/applyQC.png
vignettes/argoFloats.Rmd vignettes/flowchart.R
vignettes/flowchart.png
vignettes/plotqc.R
vignettes/plotqc.png
vignettes/qc.R vignettes/qc.Rmd vignettes/qc_flowchart.R
vignettes/qc_flowchart.png
vignettes/readProfiles.R
vignettes/readProfiles.png
vignettes/section_argo.R
dankelley/argoFloats documentation built on Oct. 19, 2021, 1:17 p.m.