getEnrichmentResults: Create a matrix with several objects resulting from...

In ddiez/q3tools: A bunch of shabby tools for the omics data analyst

Description

Create a matrix with several objects resulting from enrichment analysis with kegga() and goana()

Usage

getEnrichmentResults(..., what = "P.Up", ontology = "BP",
  use.name = FALSE, short.names = FALSE, minlength = 40)

Arguments

...	results from enrichment
what	what to plot: P.Up (default) or P.Down.
ontology	for GO results what ontology to use (default BP).
use.name	logical; whether to return the term's name or the ids.
short.names	whether to use abbreviate() to shorten rownames (handy for long GO descriptions).
minlength	minimum length for abbreviate().

Value

a matrix with p-values from several enrichment analyses.

Examples

NULL

ddiez/q3tools documentation built on May 15, 2019, 1:52 a.m.